diff --git a/JFShelp.py b/JFShelp.py new file mode 100644 index 0000000..6ec6442 --- /dev/null +++ b/JFShelp.py @@ -0,0 +1,96 @@ +# Copyright (c) 2019 Esben Rossel + # All rights reserved. + # + # Author: Esben Rossel + # + # Redistribution and use in source and binary forms, with or without + # modification, are permitted provided that the following conditions + # are met: + # 1. Redistributions of source code must retain the above copyright + # notice, this list of conditions and the following disclaimer. + # 2. Redistributions in binary form must reproduce the above copyright + # notice, this list of conditions and the following disclaimer in the + # documentation and/or other materials provided with the distribution. + # + # THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND + # ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + # IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + # ARE DISCLAIMED. IN NO EVENT SHALL AUTHOR OR CONTRIBUTORS BE LIABLE + # FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL + # DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS + # OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) + # HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT + # LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY + # OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF + # SUCH DAMAGE. + +import os +import tkinter as tk +from PIL import Image,ImageTk + +def center_window(size, window) : + window_width = size[0] #Fetches the width you gave as arg. Alternatively window.winfo_width can be used if width is not to be fixed by you. + window_height = size[1] #Fetches the height you gave as arg. Alternatively window.winfo_height can be used if height is not to be fixed by you. + if window==None: + window_x = 200 + window_y = 200 + else: + window_x = int((window.winfo_screenwidth() / 2) - (window_width / 2)) #Calculates the x for the window to be in the centre + window_y = int((window.winfo_screenheight() / 2) - (window_height / 2)) #Calculates the y for the window to be in the centre + + window_geometry = str(window_width) + 'x' + str(window_height) + '+' + str(window_x) + '+' + str(window_y) #Creates a geometric string argument + window.geometry(window_geometry) #Sets the geometry accordingly. + return + + + + + + +def jfshelpme(win,helpfor): + #### this is where we store the pictures etc + directory_path = os.path.dirname(__file__) + file_path = os.path.join(directory_path, 'images\\') + + top = tk.Toplevel(win) + scrolling = tk.Scrollbar(top) + scrolling.pack(side=tk.RIGHT, fill=tk.Y) + + frame = tk.Frame(top) + frame.pack() + text = tk.Text(frame, height=30, width=100, wrap=tk.WORD) + text.pack(side=tk.LEFT, fill=tk.Y) + scrolling.config(command=text.yview) + text.config(yscrollcommand=scrolling.set) + + image1 = Image.open(file_path+'nm405.gif') + photoImg = ImageTk.PhotoImage(image1) + image2 = Image.open(file_path+'methods.gif') + photoImg2= ImageTk.PhotoImage(image2) + image3 = Image.open(file_path+'kinetics.gif') + photoImg3= ImageTk.PhotoImage(image3) + + text.tag_configure('it', font=('Arial', 10, 'italic')) + text.tag_configure('h1', font=('Verdana', 16, 'bold')) + text.tag_configure('h2', font=('Verdana', 12, 'bold')) + text.tag_configure('h3', font=('Verdana', 10, 'bold')) + + if (helpfor == 0): #do you need help with the device? + text.image_create(tk.END,image=photoImg) + text.insert(tk.END, " Calibration\n", 'h1') + text.insert(tk.END, "\nTo calibrate the Instrument we need two laserpointer of different colors und known wavelength.\nFor example a blue [405nm] and red [650nm] one.\n") + text.insert(tk.END, "1) First take two messurements with your device und save the files with the [Save] button under a comprehensible name (e.g. 405nm.data) \n") + text.insert(tk.END, "2) Open the calibration dialog and insert the wavelength in [nm] and afterwards select the respective file. stands for the lower and for the higher wavelength.\n") + text.insert(tk.END, "3) Now you can use the [Calibrate] button to calibrate the instrument and [Save Config] will the store the configuration.\n") + text.insert(tk.END,"\nAfter this procedure you can switch the [nm] scale on and use other option:\n") + text.insert(tk.END,'\nMethods\n','h2') + text.insert(tk.END,"\nAs a Photometer to messure the transmittance or absorbance depending on the concentration of colored compounds.\n\n") + text.image_create(tk.END,image=photoImg2) + text.insert(tk.END,"\n\nKinetic\n",'h2') + text.insert(tk.END,"\nThe instrument can messure in specific intervalls over time the change in absorbance. From this data it is possible to determine the rate of the reaction.\n") + text.image_create(tk.END,image=photoImg3) + ### at the end + text.config(state=tk.DISABLED) + top.focus_set() + top.grab_set() + top.wait_window() \ No newline at end of file diff --git a/JFSphoto.py b/JFSphoto.py index 4df23b6..55b8695 100644 --- a/JFSphoto.py +++ b/JFSphoto.py @@ -23,6 +23,7 @@ from matplotlib.backend_bases import key_press_handler from tkinter import ttk import CCDpanelsetup as panel from sklearn.metrics import r2_score +from JFShelp import * ####################################### object class Messurement(object): ### nr -> na @@ -133,14 +134,15 @@ class Jfsphoto (object): def do_calibrate(self): win = tk.Toplevel() - win.geometry("450x200+100+100") + win.geometry("450x200+200+200") + #center_window([500,300],None) self.lab1 = tk.Label(win, text='Please enter filenames and nm of the peaks').grid(row=0,column=0,columnspan=6) ########## first peak self.tnm = tk.StringVar() self.tnm.set(str(self.nm)) self.tnmi = tk.StringVar() self.tnmi.set(str(self.nmi)) - self.lab2 = tk.Label(win,text='first Peak nm').grid(row=1,column=0) + self.lab2 = tk.Label(win,text='first Peak nm').grid(row=1,column=0,sticky='w') self.en1 = tk.Entry(win,textvariable=self.tnm, width= 10).grid(row=1,column=1) self.bt1 = tk.Button(win,text="select File",command=lambda: self.openfile(1)).grid(row=1,column=2) self.lnm = tk.Label(win,textvariable =self.tnm).grid(row=1,column=3) @@ -151,7 +153,7 @@ class Jfsphoto (object): self.tnm2.set(str(self.nm2)) self.tnm2i = tk.StringVar() self.tnm2i.set(str(self.nm2i)) - self.lab3 = tk.Label(win,text='second Peak nm').grid(row=2,column=0) + self.lab3 = tk.Label(win,text='second Peak nm').grid(row=2,column=0,sticky='w') self.en2 = tk.Entry(win,textvariable=self.tnm2, width= 10).grid(row=2,column=1) self.bt2 = tk.Button(win,text="select File",command=lambda: self.openfile(2)).grid(row=2,column=2) self.lnm2 = tk.Label(win,textvariable =self.tnm2).grid(row=2,column=3) @@ -161,21 +163,23 @@ class Jfsphoto (object): self.tnm_left.set(str(self.nm_left)) self.tnm_right.set(str(self.nm_right)) self.tnm_step.set(str(self.nm_step)) - self.lab4 = tk.Label(win,text="left border [nm]").grid(row=3,column=0) + self.lab4 = tk.Label(win,text="left border [nm]").grid(row=3,column=0,sticky='w') self.lab5 = tk.Label(win,textvariable=self.tnm_left).grid(row=3,column=1) self.lab6 = tk.Label(win,text="right border [nm]").grid(row=3,column=2) self.lab7 = tk.Label(win,textvariable=self.tnm_right).grid(row=3,column=3) self.lab8 = tk.Label(win,text="[nm]/point").grid(row=3,column=4) self.lab9 = tk.Label(win,textvariable=self.tnm_step).grid(row=3,column=5) - self.bt3 = tk.Button(win,text="Calibrieren",command=self.calibrate,state=tk.DISABLED) - self.bt3.grid(row=4,column=0) + self.bt3 = tk.Button(win,text="Calibrate",command=self.calibrate,state=tk.DISABLED,padx=10) + self.bt3.grid(row=4,column=0,sticky='w') ############ limit for the baseline the baseline starts and ends at a higher intensisity depending on # the spectrum of the light source self.lab10 = tk.Label(win,text="threshold for the baseline").grid(row=5,column=0,columnspan=2, sticky="w") self.en3 = tk.Entry(win,textvariable=self.baseline_limit, width= 10).grid(row=5,column=2) ############ Save Load config - self.bt4 = tk.Button(win,text="Load Config",command=self.conf_read).grid(row=6,column=0) - self.bt5 = tk.Button(win,text="Save Config",command=self.conf_write).grid(row=6,column=1) + self.bt4 = tk.Button(win,text="Load Config",command=self.conf_read,padx=10).grid(row=6,column=0,sticky='w') + self.bt5 = tk.Button(win,text="Save Config",command=self.conf_write,padx=10).grid(row=6,column=1,sticky='w') + ############ Help + self.bt5 = tk.Button(win,text="Help me",command=lambda roots = win ,helpfor=0: jfshelpme(roots,helpfor),padx=10).grid(row=7,column=0,sticky='w') ########### dialog modal win.focus_set() diff --git a/images/kinetics.gif b/images/kinetics.gif new file mode 100644 index 0000000..cf75d83 Binary files /dev/null and b/images/kinetics.gif differ diff --git a/images/methods.gif b/images/methods.gif new file mode 100644 index 0000000..a72fbf2 Binary files /dev/null and b/images/methods.gif differ diff --git a/images/nm405.gif b/images/nm405.gif new file mode 100644 index 0000000..862d1ba Binary files /dev/null and b/images/nm405.gif differ diff --git a/images/nm405.jpg b/images/nm405.jpg new file mode 100644 index 0000000..9f2c818 Binary files /dev/null and b/images/nm405.jpg differ